2002 Ford Mustang - Engine Swap Woes

I left the original wiring harnesses on the V8. The motor harness matched up with the chassis harness and now everything works I have excellent fuel pressure have fire to the coil and distributor but have no pulse to send Spark it’s not the Anti-Theft cuz yes it did go off but I had someone coming in and reprogramming key well now that anti theft light flashing light is off