Did any fluid foam out when it burned up? A good hard catastrophic burnout can get the fluid hot enough to foam out the vent and dipstick tube.
So it’s impossible to know how much fluid was really there before it burned out.
Add that to documentation showing it was checked two times before the failure, and however dubious the quickie lube place’s documentation may be, it is far more credible than the dealer pointing fingers at whoever they can.
Documents support the theory that it was checked. The accidental drain theory cannot be supported by anything but speculation, conjecture, finger pointing, and blamestorming. I’m not saying it’s impossible. I’m sure it happens. Just saying you held up your end, got paperwork and they’ve got squat and are not holding up their end.
To insinuate that they drained the transmission of 2.5 quarts of oil before realizing it was not the engine is simply them groping for anything they can come up with explain why they don’t want to honor their warranty.
The real reason they don’t want to honor their warranty is because it will cost them money. They will always blame someone else and try to weasel out of their warranty.
You are not a mechanic. You have documentation that says it was checked by pros (legal definition of a professional, not necessarily indicative of their skill level) 3k miles before failure, without any indication of a leak that would prompt a reasonable person to check it more frequently.
You paid good money for a warranty. You paid extra money to buy certified pre-owned from the dealer. Make them honor their warranty. If they refuse, talk to a lawyer.
Contrary to what others are implying, you don’t need to check your transmission fluid more often than at oil changes unless it’s demonstrated fluid loss. I run a fleet with 7 trucks that have had exactly 0 transmission failures due to low fluid level despite checking at 7500 mile intervals unless there is a leak. Why? If it’s not leaking, transmissions don’t use oil! And if it’s leaking, it will look like OJ Simpson’s been around. It’s messy and obvious.
I can tell you that transmissions fail all the time despite having the proper amount of fluid. Our failures are caused by pulling heavy trailers up and down steep grades day in and day out. Your failure was caused by driving in the Rocky Mountains in a vehicle that is notorious for having extremely high ATF temps due to marginal provision for fluid cooling. When your ATF reached 350F you probably left two foamy brown quarts on the road behind you.